Module colour to biological function map

Reads the bundled annotation that names each co-expression module, e.g. "blue" -> "Respiration/Mitochondrial translation".

Usage

load_module_functions(module_set)

Arguments

module_set

Module set: "rodent" or "multispecies", the two sets published with the clocks (see list_module_clocks), or "human". Required: a module colour names a different module in each set.

Value

A named character vector, module colour to function, or an empty vector when the annotation is unavailable.

Examples

head(load_module_functions("rodent"))
#>                                   black                                    blue 
#>         "Myogenesis/Muscle contraction" "Respiration/Mitochondrial translation" 
#>                                   brown                                    cyan 
#>  "Chromatin modification/Transcription"                       "Heme metabolism" 
#>                               darkgreen                                darkgrey 
#>          "Cell adhesion/VEGF signaling"     "Protein processing/mTOR signaling"