Download clock models from Zenodo — download_clocks • tAge

Downloads the given clock model files from the Zenodo record and returns the input augmented with a path column pointing to the local files.

Usage

download_clocks(
  clocks,
  dest_dir = "clocks",
  record = .TAGE_ZENODO_RECORD,
  overwrite = FALSE,
  quiet = FALSE
)

Arguments

clocks: Either a data frame returned by list_clocks (the filename column is used) or a character vector of model file names.
dest_dir: Directory to save the models into. Created if needed. Default "clocks".
record: Character Zenodo record id. Defaults to the published record.
overwrite: Logical. Re-download files that already exist. Default FALSE.
quiet: Logical. Suppress progress messages. Default FALSE.

Value

The clocks data frame with an added path column.

Examples

if (FALSE) { # \dontrun{
clocks <- list_clocks(type = "EN", outcome = "Mortality",
                      species = "Multispecies", tissue = "Multi-Tissue")
clocks <- download_clocks(clocks, dest_dir = "clocks")
model_paths <- list(
  scaled_diff = clocks$path[clocks$scaling == "Scaled"],
  yugene_diff = clocks$path[clocks$scaling == "YuGene"]
)
} # }